What parmeters to pass in the logicalSave() method so that I can take complete back up , instead of extension which is by default.
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The scope depends on the type of repository and of the pupose of the backup
To transfert customizations of a system database (systemdb), it is recommended to backup extensions only (metamodel layer and technical level layer, no data)
Example (VB script)
To transfer data of a data repository, it is recommended to backup all data (no, metamodel layer, no technical level layer, data full)
More details on API function in the API documentation in javadoc format. See this KB